PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN47838.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 317aa    MW: 34807.9 Da    PI: 7.3006
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN47838.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH120.00041842221255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  KHN47838.1 184 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 222
                 6677889999999999998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.706172221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-10182233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.57E-6182226No hitNo description
Gene3DG3DSA:4.10.280.104.3E-7186229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MMAGNPNWWT MHPPSLIPPQ YVFGSSSIPF NSSTQNQEPP QSLSQLLFTG LPGEEERIAF  60
SPFQSKKLDE WNDQMLNIPS PIVPMPDVIK QEVSQSGSLY HHGHDQEFQV SGAPWSHMVP  120
ISSSPRSSVA SFSSNNLLDF TYNKTDHRKN QLPDTSECNS TATAGVYKKT KSQPSSSQPP  180
LKVRKEKLGD RITALHQLVS PFGKTDTASV LLEAIGYIRF LQGQIEALSS PYLGNGSKNM  240
RNPQSVHGER NSVFPEDPGQ LLNDNGLKRK GAPNQDAKDK PSDLKSRGLC LVPVSCTQHV  300
GNENGADYWA PAYGSGF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003531664.10.0PREDICTED: transcription factor bHLH68-like isoform X2
SwissprotQ8S3D12e-66BH068_ARATH; Transcription factor bHLH68
TrEMBLA0A0B2SSG60.0A0A0B2SSG6_GLYSO; Transcription factor bHLH68
TrEMBLI1KV520.0I1KV52_SOYBN; Uncharacterized protein
STRINGGLYMA08G21770.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12233379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.18e-64bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]